PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR03G31620.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 419aa    MW: 43672.2 Da    PI: 5.054
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR03G31620.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.94.4e-13229280556
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      + +rrkq+NRe+ArrsR RK a + eLe  v +L  eN++L  +l   +++ 
  LPERR03G31620.1 229 RLQRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKF 280
                      689**************************************98887777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-17225289IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.438227282IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-10227281No hitNo description
SuperFamilySSF579591.69E-9229278No hitNo description
PfamPF001705.1E-10229278IPR004827Basic-leucine zipper domain
PfamPF124988.6E-51296412IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MDRVFSVEEI SDPFWSAPAP AHQQDGGGGG GAGAGGGRAG GGGGGGGANA MNRCPSEWYF  60
QKFLEEAVLD SPVPNPSPRG EAGGTMRGAG GVVPVDVKQP QLSAAAGTSA VVDPVEYNAM  120
LKQKLEKDLA AVAMWRASGT MPPERSAAGS SLLNSDVSHI GTSNSIAGNA TPVQNKLIAT  180
SGGLGSQLVQ NIDVLVKQPT SSSSREQSDD DDMEGEAETA GSGKPTDQRL QRRKQSNRES  240
ARRSRSRKAA HLNELEAQVS QLRVENSSLL RRLADVNQKF NEAAVDNRVL KADVETLRAK  300
VKMAEDSVKR VTGMNALFPA ASDMSSLSMP FNGSPSEATS DAAVPIQDDP NNYFATNNDV  360
GGNTYMPDIP SSAQEDEDFV NGALAAGKIG RTASLQRVAS LEHLQKRMCG GPASSGSTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13543GGRAGGGGG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8293750.0CT829375.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI207J16, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015631619.10.0PREDICTED: light-inducible protein CPRF2
TrEMBLA0A0D9W0520.0A0A0D9W052_9ORYZ; Uncharacterized protein
STRINGBGIOSGA009643-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-41bZIP family protein